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Dipartimento di Fisica e Scienze della Terra

Publications 2011



1. Polverini E, Lardi P, Mazzini A, Sorbi RT, Virna C, Ramoni R, Favilla R (2011) Characterization of a deswapped triple mutant bovine odorant binding protein. International Journal of Molecular Sciences 12: 2294-2314.


2. Polverini E, Coll EP, Tieleman DP, Harauz G (2011) Conformational choreography of a molecular switch region in myelin basic protein-Molecular dynamics shows induced folding and secondary structure type conversion upon threonyl phosphorylation in both aqueous and membrane-associated environments. Biochimica et Biophysica Acta - Biomembranes 1808: 674-683.


3. Losi A, Gärtner W (2011) Old chromophores, new photoactivation paradigms, trendy applications: Flavins in blue light-sensing photoreceptors. Photochemistry and Photobiology 87: 491-510.


4. Raffelberg S, Mansurova M, Gärtner W, Losi A (2011) Modulation of the photocycle of a LOV domain photoreceptor by the hydrogen-bonding network. Journal of the American Chemical Society 133: 5346-5356.


5. Stierl M, Stumpf P, Udwari D, Gueta R, Hagedorn R, Losi A, Gärtner W, Petereit L, Efetova M, Schwarzel M, Oertner TG, Nagel G, Hegemann P (2011) Light modulation of cellular cAMP by a small bacterial photoactivated adenylyl cyclase, bPAC, of the soil bacterium Beggiatoa. Journal of Biological Chemistry 286: 1181-1188.


6. Abbruzzetti S, Faggiano S, Spyrakis F, Bruno S, Mozzarelli A, Astegno A, Dominici P, Viappiani C (2011) Oxygen and Nitric Oxide Rebinding Kinetics in Nonsymbiotic Hemoglobin AHb1 from Arabidopsis thaliana. IUBMB Life 63: 1094–1100.


7. Abbruzzetti S, Viappiani C (2011) Volume Changes Associated with Solute–Solvent Reorganization Following Photoinduced Proton Transfer in Aqueous Solutions of 6-Methoxyquinoline. In: Han KL, Zhao GJ, editors. Hydrogen Bonding and Transfer in the Excited State. Chichester: John Wiley & Sons, Ltd. pp. 797-803.


8. Bettati S, Luque FJ, Viappiani C (2011) Protein dynamics: Experimental and computational approaches. Biochimica et Biophysica Acta - Proteins and Proteomics 1814: 913–915.


9. Bisht NK, Abbruzzetti S, Uppal S, Bruno S, Spyrakis F, Mozzarelli A, Viappiani C, Kundu S (2011) Ligand migration and hexacoordination in type 1 non symbiotic rice hemoglobin. Biochimica et Biophysica Acta - Proteins and Proteomics 1814: 1042–1053.


10. Bruno S, Ronda L, Abbruzzetti S, Viappiani C, Bettati S, Maji S, Mozzarelli A (2011) Protein encapsulation, conformations, and nanobiotools. In: Nalwa HS, editor. Encyclopedia of Nanoscience and Nanotechnology: American Scientific Publishers. pp. 481-517.


11. Coppola D, Bruno S, Ronda L, Viappiani C, Abbruzzetti S, diPrisco G, Verde C, Mozzarelli A (2011) Low affinity PEGylated hemoglobin from Trematomus bernacchii, a model for hemoglobin-based blood substitutes. BMC Biochemistry 12: 66.


12. Forti F, Boechi L, Bikiel D, Martí MA, Nardini M, Bolognesi M, Viappiani C, Estrin D, Luque FJ (2011) Ligand migration in Methanosarcina acetivorans protoglobin: effects of ligand binding and dimeric assembly. Journal of Physical Chemistry B 115: 13771–13780.


13. Spyrakis F, Bruno S, Bidon-Chanal A, Luque FJ, Abbruzzetti S, Viappiani C, Dominici P, Mozzarelli A (2011) Oxygen binding to Arabidopsis thaliana AHb2 nonsymbiotic hemoglobin: evidence for a role in oxygen transport. IUBMB Life 63: 355–362.


14. Spyrakis F, Faggiano S, Abbruzzetti S, Dominici P, Cacciatori E, Astegno A, Droghetti E, Feis A, Smulevich G, Bruno S, Mozzarelli A, Cozzini P, Viappiani C, Bidon-Chanal A, Luque FJ (2011) Histidine E7 dynamics modulates ligand exchange between distal pocket and solvent in AHb1 from Arabidopsis thaliana. Journal of Physical Chemistry B 115: 4138–4146.


15. Spyrakis F, Luque FJ, Viappiani C (2011) Structural analysis in nonsymbiotic hemoglobins: what can we learn from inner cavities? Plant Science 181: 8-13.